ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10455-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCACTCGACCACGAGGTCGAGTGT miRNA* CACTCGACCCCCTGGTCGAGTAGAG mismatches: 4 bulges: 1 |
pre-miRNA
GCAGACCACTCGACCCCCTGGTCGAGTAGAGGACATCACCACTTCACCTCACCACTCGACCACGAGGTCGAGTGTCTTC
dot-bracket secondary structure
..((((.((((((((.(.(((((((((.((((..............))))...))))))))).).))))))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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GCAGACCACTCGACCCCCTGGTCGAGTAGAGGACATCACCACTTCACCTCACCACTCGACCACGAGGTCGAGTGTCTTC
dot-bracket secondary structure
..((((.((((((((.(.(((((((((.((((..............))))...))))))))).).))))))))))))..
SIMILARITIES| miRBase no hits PMRD ath-miRf10127-akr: 1e-39 microPC no hits | UniProt no hits RFAM MIR854: 0.0000000003 |
Identical with: ath-miRf10767-akr from PMRD (MNEST047867) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
