ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10457-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TACTCGACCATGGGGTCGAGTGGTG miRNA* CTCGACCAGGGGGTTGAGTGAT mismatches: 7 bulges: 0 |
pre-miRNA
TTGAGTGATGATACTCGACCAGGGGGTTGAGTGATGTGGTAGAGTGAATGGCCGAGTGATGGTCAAGTGGTGTGGTGTAGTGATACTCGACCATGGGGTC
GAGTGGTGTCATCGA
dot-bracket secondary structure
.....(((((((((((((((....(((((((((.(..(.((.(.((..((((((.....))))))..)).).)).)..)....)))))))))....))))
))))...))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
TTGAGTGATGATACTCGACCAGGGGGTTGAGTGATGTGGTAGAGTGAATGGCCGAGTGATGGTCAAGTGGTGTGGTGTAGTGATACTCGACCATGGGGTC
GAGTGGTGTCATCGA
dot-bracket secondary structure
.....(((((((((((((((....(((((((((.(..(.((.(.((..((((((.....))))))..)).).)).)..)....)))))))))....))))
))))...))))))).
SIMILARITIES| miRBase no hits PMRD ath-miRf10456-akr: 1e-56 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10458-akr from PMRD (MNEST047558) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
