ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10460-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTACTCGACCAGTGGGTCGAGTGT miRNA* ACTCGACCATGTGGTCGAGTGGTG mismatches: 4 bulges: 0 |
pre-miRNA
GGTGGTACTCGACCATGTGGTCGAGTGGTGATGTGGAGTGATGAGGCCTTCTACTCGACCAGGGGGTCGAGTGGTTGTTGAAGGAGTGGAGCCATCTACT
CGACCAGTGGGTCGAGTGTTCTGCT
dot-bracket secondary structure
((..((((((((((...(((((((((((....((((..(.((....((((((((((((((....)))))))))......))))).)).)..)))))))))
))))))...)))))))))..)..))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
GGTGGTACTCGACCATGTGGTCGAGTGGTGATGTGGAGTGATGAGGCCTTCTACTCGACCAGGGGGTCGAGTGGTTGTTGAAGGAGTGGAGCCATCTACT
CGACCAGTGGGTCGAGTGTTCTGCT
dot-bracket secondary structure
((..((((((((((...(((((((((((....((((..(.((....((((((((((((((....)))))))))......))))).)).)..)))))))))
))))))...)))))))))..)..))
SIMILARITIES| miRBase no hits PMRD ath-miRf10286-akr: 5e-31 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
