ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10468-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CACTCGACCCCGAGGTCGAGT miRNA* TCGACCCCCTGGTCGAGTAGA mismatches: 4 bulges: 0 |
pre-miRNA
GACCACTCGACCCCCTGGTCGAGTAGAGGACATCACCACTTCACCTCATCACTCGACCCCGAGGTCGAGTGTC
dot-bracket secondary structure
...(((((((((.(..((((((((.((((..............))))...))))))))..).)))))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
GACCACTCGACCCCCTGGTCGAGTAGAGGACATCACCACTTCACCTCATCACTCGACCCCGAGGTCGAGTGTC
dot-bracket secondary structure
...(((((((((.(..((((((((.((((..............))))...))))))))..).)))))))))..
SIMILARITIES| miRBase no hits PMRD ath-miRf10467-akr: 5e-36 microPC no hits | UniProt no hits RFAM MIR854: 0.000000004 |
Identical with: ath-miRf10150-akr from PMRD (MNEST047250) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
