ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10472-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGACCCCCTGGTCGAGTAT miRNA* ACTCGACCACCAGGTCGTGT mismatches: 4 bulges: 0 |
pre-miRNA
GAAGACATACTCGACCACCAGGTCGTGTGCATCCAGCACCATACTCGACCCCCTGGTCGAGTGACTTTGGAGCCATTCTTCCCATCTACTCGACCCCCTA
GTCGAGTATCCTCAGCTCAGGCTACTCGATGACGCCATCGACCCCCTGGTCGAGTATCACTTC
dot-bracket secondary structure
((((..(((((((((((...(((((.(((((((.((....(((((((((.....(((((((((.....((((......))))....))))))))).....
)))))))))....(((....))).)).)))).)))...)))))...)))))))))))..))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
GAAGACATACTCGACCACCAGGTCGTGTGCATCCAGCACCATACTCGACCCCCTGGTCGAGTGACTTTGGAGCCATTCTTCCCATCTACTCGACCCCCTA
GTCGAGTATCCTCAGCTCAGGCTACTCGATGACGCCATCGACCCCCTGGTCGAGTATCACTTC
dot-bracket secondary structure
((((..(((((((((((...(((((.(((((((.((....(((((((((.....(((((((((.....((((......))))....))))))))).....
)))))))))....(((....))).)).)))).)))...)))))...)))))))))))..))))
SIMILARITIES| miRBase no hits PMRD ath-miRf10159-akr: 2e-89 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10159-akr from PMRD (MNEST047259) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
