miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST047575
species: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10475-akr

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGTGGTCGAGTGTTGAGGTGAAGT

miRNA*
GAAGGTGAAGACACTCGGCCTCGGGG

mismatches: 7
bulges: 1

View larger
pre-miRNA
GCAATGAAGGTGAAGACACTCGGCCTCGGGGTCGAGTGATGGATCGAGTGATGGTCAGGTGATGGGATGAAGACACTCGACCTCGGGGTCGAGTGATGTG
ATCGAGTGATGGTCAGGTGATGGGATGAAGACACTCGACCTCGGGGTCGAGTGATGTGATCGAGTGATGGTCAGGTGATGGAGATGAAGACGCTCGACTT
CGTGGTCGAGTGTTGAGGTGAAGT
TGT


dot-bracket secondary structure
(((((...(.(...(((((((((((.((((((((((((.(..((((..((((.((((..((((.(.((.....((((((((((((((((((((((((.(.
((((..((.....))..)))).).)).....)))))))))))))))))))))))).).))))..)))).))))..))))..)........))))))))))
)).)))))))))))..).)...))
)))



SIMILARITIES
miRBase no hits

PMRD ath-miRf10474-akr: 3e-123

microPC no hits
UniProt no hits

RFAM no hits

Identical with: ath-miRf10476-akr from PMRD (MNEST047576)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record





Liczniki na strone;