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ABOUT THIS RECORD
ID:
MNEST047592
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10492-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAGACACTCGACCTCGGGGTCGAGTGA
miRNA*
ACTCGGCCTCGGGGTGGAGTGATGTGA
mismatches:
5
bulges:
0
View larger
pre-miRNA
GGTGAAGAC
ACTCGGCCTCGGGGTGGAGTGATGTGA
TCGAGTTATTGTCAGGTGATGGGATG
AAGACACTCGACCTCGGGGTCGAGTGA
TGTGATC
dot-bracket secondary structure
(((.(...(
(((((((((((((((.(((((...(.(
((..((((((....))))))..))).
)...))))).)))))))))))))))).
..).)))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10491-akr
:
1e-49
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf10491-akr
from PMRD (
MNEST047591
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record