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ABOUT THIS RECORD
ID:
MNEST047597
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10497-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TACTCGACTAAGGGGTCGAGTGGT
miRNA*
ACTCGACCTCGAGGTCGAGTGAT
mismatches:
3
bulges:
1
View larger
pre-miRNA
AGAC
ACTCGACCTCGAGGTCGAGTGAT
GTGATCGAGTGACGGTCAGGTGGTGGAGGTGAATATACTCGACCAGGGGGTCGAGGGGTGAGATGAAGTTGTG
AAGTCCCC
TACTCGACTAAGGGGTCGAGTGGT
CT
dot-bracket secondary structure
((((
((((((((((..((((((((.((
.((((((.....)))))).))((.(((..........(((((((....)))))))..(..(.......)..).
...)))))
.))))))))..)))))))))).))
))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10150-akr
:
2e-36
microPC
no hits
UniProt
no hits
RFAM
MIR854: 3e-45
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record