ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10642-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGTACATCACTTTTAGTGT miRNA* ACTAAAAGTGATGTACAATC mismatches: 0 bulges: 0 |
pre-miRNA
TGGATTGTACATCACTTTTAGTGTACAAATGTAAAGTGTACACTGTGTATTTTTATATATATTTGTACACTAAAAGTGATGTACAATCTA
dot-bracket secondary structure
((((((((((((((((((((((((((((((((((((.((((.....)))).)))...)))))))))))))))))))))))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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TGGATTGTACATCACTTTTAGTGTACAAATGTAAAGTGTACACTGTGTATTTTTATATATATTTGTACACTAAAAGTGATGTACAATCTA
dot-bracket secondary structure
((((((((((((((((((((((((((((((((((((.((((.....)))).)))...)))))))))))))))))))))))))))))))))
SIMILARITIES| miRBase ath-MIR5014: 0.00000000007 PMRD ath-miRf10917-akr: 4e-46 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10917-akr from PMRD (MNEST048017) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
