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ABOUT THIS RECORD
ID:
MNEST047771
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10671-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACTCGACCTCGTGGTCGAGTGGTG
miRNA*
TAGTCGACCTCGGGGTCGAGTGC
mismatches:
3
bulges:
0
View larger
pre-miRNA
GATGAGGAC
ACTCGACCTCGTGGTCGAGTGGTG
AGGTGAAGTGGTGATTTCTTCTACTCGACCTGGGGGTCGAGTGGTCTCTTGAGATCTTGAAGCTCC
T
AGTCGACCTCGGGGTCGAGTGC
TTTGAC
dot-bracket secondary structure
...((((.(
(((((((((((.((((((.(((.(
((.(........((((((..((((((((((....))))))))))......))))))....).))))
)
).)))))).)))))))))))))
)))...
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10033-akr
:
1e-68
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf10032-akr
from PMRD (
MNEST047132
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record