ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10675-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CACTCGACCTCGGGGTCGAGTGGT miRNA* TACTCGACCAGGGGGTCGAGTGGTC mismatches: 3 bulges: 1 |
pre-miRNA
AGACACTCGACCTCGGGGTCGAGTGGTGAGGTGAAGTGGTGATGTCCTCTACTCGACCAGGGGGTCGAGTGGTCT
dot-bracket secondary structure
((((((((((((((..((((((((((.((.((.(.....).)).))..))))))))))..)))))))))).))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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AGACACTCGACCTCGGGGTCGAGTGGTGAGGTGAAGTGGTGATGTCCTCTACTCGACCAGGGGGTCGAGTGGTCT
dot-bracket secondary structure
((((((((((((((..((((((((((.((.((.(.....).)).))..))))))))))..)))))))))).))))
SIMILARITIES| miRBase no hits PMRD ath-miRf11014-akr: 3e-37 microPC no hits | UniProt no hits RFAM MIR854: 0.000000000004 |
Identical with: ath-miRf11014-akr from PMRD (MNEST048114) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
