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ABOUT THIS RECORD
ID:
MNEST047778
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10678-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTTACTCGACCTGGTGGTCGAGTGG
miRNA*
ACTCGACCTGGGGGTCGAGTATGTCTT
mismatches:
4
bulges:
2
View larger
pre-miRNA
GAGCTGAG
GTTACTCGACCTGGTGGTCGAGTGG
ATGGGAAGAATGGCTCCAAAGTCACTCGACCTGGGGGTCGAGTATGTGGGAAGAATGGCTCCAAAGT
C
ACTCGACCTGGGGGTCGAGTATGTCTT
CTAGTTC
dot-bracket secondary structure
((((((((
(.((((((((((...((((((((((
...(((...((...(((...((.((((((((....))))))))))...)))...))...)))....)
)
))))))))...))))))))))...)))
).)))))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10679-akr
:
2e-70
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record