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ABOUT THIS RECORD
ID:
MNEST047947
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10847-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCAGCTGTGTCTTCGTTGTCATC
miRNA*
TGACAATGAAGACATAAAGGAGC
mismatches:
3
bulges:
0
View larger
pre-miRNA
CTTGATTTGA
TCAGCTGTGTCTTCGTTGTCATC
ACAAAGTTCGTTAATCTCTATTATCAAGTCCGGTGAAGGTCCTTAAGATATTTAAGTTTGAAGAAAT
TTGTGA
TGACAATGAAGACATAAAGGAGC
AGATCGAG
dot-bracket secondary structure
(((((((((.
((...((((((((((((((((((
(((((.(((.((((.((..(.(((((((.((......))..)))..)))).)..)).)))).))).)
))))))
))))))))))))))))...)).)
))))))))
SIMILARITIES
miRBase
ath-MIR3932b
:
6e-74
PMRD
ath-miRf11101-akr
:
3e-57
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-MIR3932b
from miRBase (
MNEST040230
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record