ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10849-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCAGAGGACAGACCAAAGA miRNA* TTTGGTCTGTCCTCTGCACG mismatches: 0 bulges: 0 |
pre-miRNA
TTCAAGAACGTGCAGAGGACAGACCAAAGATGTCGTCGGTGATTGTCCCGTTCTGTACTCGATGACGAATCATCAGTATCAAGAGAACTTCTTCTGACGC
AATAACCGGGCCGTCTAGGGCTGAAGTATTCCCCTTTTTCGCTACCGAGCATTAAAACCACCGACGACATCTTTGGTCTGTCCTCTGCACGTTCTTGAA
dot-bracket secondary structure
.((((((((((((((((((((((((((((((((((((((((.((.....((((.(((...(((((....))))).(..(((..((.....))..)))..)
......(((.((.....)).)))...................))).)))).....)).)))))))))))))))))))))))))))))))))))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
TTCAAGAACGTGCAGAGGACAGACCAAAGATGTCGTCGGTGATTGTCCCGTTCTGTACTCGATGACGAATCATCAGTATCAAGAGAACTTCTTCTGACGC
AATAACCGGGCCGTCTAGGGCTGAAGTATTCCCCTTTTTCGCTACCGAGCATTAAAACCACCGACGACATCTTTGGTCTGTCCTCTGCACGTTCTTGAA
dot-bracket secondary structure
.((((((((((((((((((((((((((((((((((((((((.((.....((((.(((...(((((....))))).(..(((..((.....))..)))..)
......(((.((.....)).)))...................))).)))).....)).)))))))))))))))))))))))))))))))))))))))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|B0F2A9|SRK_ARATH: 0.0000000001 RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
