ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10862-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGGAGACTGCGTTATGCATTTG miRNA* TTCTCTGGCGTATTCCTCAG mismatches: 5 bulges: 3 |
pre-miRNA
GGGCCGAGGAGACTGCGTTATGCATTTGGGATCTCACAAGCTTCATCTCGTTTTCTGCCTTGGCTAGGGAGAGCTTGATAGCGCTTATTTCCTATTCTCT
GGCGTATTCCTCAGCCC
dot-bracket secondary structure
((((.((((((..(((((((......(((((........(((..(((..(((((((((....))...)))))))..)))))).......))))).....)
)))))))))))).))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
GGGCCGAGGAGACTGCGTTATGCATTTGGGATCTCACAAGCTTCATCTCGTTTTCTGCCTTGGCTAGGGAGAGCTTGATAGCGCTTATTTCCTATTCTCT
GGCGTATTCCTCAGCCC
dot-bracket secondary structure
((((.((((((..(((((((......(((((........(((..(((..(((((((((....))...)))))))..)))))).......))))).....)
)))))))))))).))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
additional data
download this record
