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ABOUT THIS RECORD
ID:
MNEST047966
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10866-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCACTCGACCCCCTGGTCGAGTA
miRNA*
CTCGACCCCAAGGTCGAGTGTC
mismatches:
5
bulges:
1
View larger
pre-miRNA
GAGA
CCACTCGACCCCCTGGTCGAGTA
GAGGACTTCTCGATTTCATCATATCACTCTACCTCGAGGTCGAGTGTCTTCATCTCCATCACCTGACCACCAC
TCGATCACCTCA
CTCGACCCCAAGGTCGAGTGTC
TTC
dot-bracket secondary structure
((((
(.((((((((....((((((((.
((((.......(((........)))............(((((((((...(((...........)))....)))
)))))).)))))
)))))))....)))))))))))
)).
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10026-akr
:
1e-47
microPC
no hits
UniProt
no hits
RFAM
MIR854: 0.0001
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record