ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10877-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGACCTGGGGGTCGAGTGGT miRNA* TACTCGACCTCTGGGTCGAGT mismatches: 3 bulges: 0 |
pre-miRNA
CTGCTCGACCTGGGGGTCGAGTGGTCTCTTGAGGTCTTGAAGCTCCTACTCGACCTCTGGGTCGAGTGG
dot-bracket secondary structure
(..(((((((..((((((((((((...(((.((...)).)))...))))))))))))..)))))))..)
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
CTGCTCGACCTGGGGGTCGAGTGGTCTCTTGAGGTCTTGAAGCTCCTACTCGACCTCTGGGTCGAGTGG
dot-bracket secondary structure
(..(((((((..((((((((((((...(((.((...)).)))...))))))))))))..)))))))..)
SIMILARITIES| miRBase no hits PMRD ath-miRf11169-akr: 1e-33 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10273-akr from PMRD (MNEST047373) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
