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ABOUT THIS RECORD
ID:
MNEST047980
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10880-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GCTCGACCTGGGGGTCGAGTGGT
miRNA*
TACTCGACCTCTTGGTCGAGTGG
mismatches:
3
bulges:
0
View larger
pre-miRNA
CT
GCTCGACCTGGGGGTCGAGTGGT
CTCTTGAGATCTTGAAGCTCC
TACTCGACCTCTTGGTCGAGTGG
dot-bracket secondary structure
(.
.(((((((.(((((((((((((.
..(((.((...)).)))...)
)))))))))))).)))))))..)
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf11130-akr
:
1e-33
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf11130-akr
from PMRD (
MNEST048230
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record