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ABOUT THIS RECORD
ID:
MNEST047991
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10891-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCGACCTGAGGGTCGAGTGGT
miRNA*
TACTCGACCTCTGGGTCGAGTG
mismatches:
3
bulges:
0
View larger
pre-miRNA
CTA
CTCGACCTGAGGGTCGAGTGGT
CTCTTGAGATCCTGAAGCTCC
TACTCGACCTCTGGGTCGAGTG
G
dot-bracket secondary structure
(((
((((((((..(((((((((((.
..(((.((...)).)))...)
))))))))))..))))))))))
)
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10893-akr
:
1e-33
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf10892-akr
from PMRD (
MNEST047992
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
degradome data
download this record