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ABOUT THIS RECORD

ID: MNEST047996
species: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10896-akr

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGAGGAGGAGTACGATACGA

miRNA*
AGCTGCTCCTCTTCTAC

mismatches: 5
bulges: 1

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pre-miRNA
GGATAGGGAGGAGGAGTACGATACGAGCATGTATCATTTCAGTGAGCATGTACCTCCAGCGAGGGAGAGCAAGAGCTTGAGCGAAGCTCACAGAAACAAC
AGCAAGTTGCAGAAGTGGTGCAAGAAACAAGATAGGCTACTCATCAAGTGCTTCAAGGCCATCAAGTTTCTGACTGACAAGCTAAGCTGCTCCTCTTCTA
C
C


dot-bracket secondary structure
......((((((((((((.(.....(((..((((((((((.((((((.....((((....))))..((((....)))).......)))))).....((((
.....))))..)))))))))).((((((..(((.((((..................)))))))..)))))).........)))...))))))))))))).
.
.



SIMILARITIES
miRBase ath-MIR854e: 2e-81

PMRD ath-miR854d: 2e-81

microPC no hits
UniProt no hits

RFAM MIR854: 3e-111

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: not a miRNA
additional data
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