ABOUT THIS RECORDspecies: Arabidopsis thaliana
miRNA family: MIRf427
source: PMRD, original name: ath-miRf10919-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGAGCAAGAGCAGCAGCTTT miRNA* AGCTGTGGCTCTTGTGCTTCCT mismatches: 2 bulges: 1 |
pre-miRNA
TGATCTAAGGAGAGCAAGAGCAGCAGCTTTGAACATTGTTCCAACATCTACAGGAGCAGCCAAAGCTGTGGCTCTTGTGCTTCCTAACCTCA
dot-bracket secondary structure
.......(((((.((((((((.(((((((((....(((((((..........))))))).))))))))).))))))))..))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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TGATCTAAGGAGAGCAAGAGCAGCAGCTTTGAACATTGTTCCAACATCTACAGGAGCAGCCAAAGCTGTGGCTCTTGTGCTTCCTAACCTCA
dot-bracket secondary structure
.......(((((.((((((((.(((((((((....(((((((..........))))))).))))))))).))))))))..))))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|P09672|G3PA_SINAL: 0.00000001 RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
