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ABOUT THIS RECORD

ID: MNEST048165
species: Arabidopsis thaliana
source: PMRD, original name: ath-miRf11065-akr

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAGTGGTGATGTCTTCTACTCGACCT

miRNA*
GTCGAGTGGTTTGTCATGATCAGGTCC

mismatches: 7
bulges: 1

View larger
pre-miRNA
TGGTGAGGTGAAGTGGTGATGTCTTCTACTCGACCTGGGGGTCGAGTGGTCTCTTGAGATCTTGAAGCTCCTACTCGACCTCTGGGTCGAGTGGTTTGTC
ATGATCAGGTCC
GCTTCTTCCA


dot-bracket secondary structure
.((.(((((((..((((.(((.(..((((((((((..((((((((((((...(((.((...)).)))...))))))))))))..))))))))))...).)
)).))))..).)
)))))..)).



SIMILARITIES
miRBase no hits

PMRD ath-miRf11077-akr: 3e-57

microPC no hits
UniProt no hits

RFAM no hits

Identical with: ath-miRf11064-akr from PMRD (MNEST048164)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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