ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf11068-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCCTGAGCTGAGGATACTCGACC miRNA* TCGAGTATGTCTTCTGGTTCTGGCTC mismatches: 1 bulges: 3 |
pre-miRNA
GTAGCCTGAGCTGAGGATACTCGACCAAGTGGTCGAGTAGGTGGGAAGAATGACTCCAAAGTCACTCGACCTGGGGGTCGAGTATGTCTTCTGGTTCTGG
CTC
dot-bracket secondary structure
..((((.(((((((((((((((((((....((((((((.(((.(((........)))...)))))))))))....))))))))..)))))).))))).))
)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
GTAGCCTGAGCTGAGGATACTCGACCAAGTGGTCGAGTAGGTGGGAAGAATGACTCCAAAGTCACTCGACCTGGGGGTCGAGTATGTCTTCTGGTTCTGG
CTC
dot-bracket secondary structure
..((((.(((((((((((((((((((....((((((((.(((.(((........)))...)))))))))))....))))))))..)))))).))))).))
)).
SIMILARITIES| miRBase no hits PMRD ath-miRf10781-akr: 1e-46 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
