miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST048169
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf11069-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CACTCGACCCCCTGGTCGAGTAGA
miRNA*
ACTCGACCACGAGGTCGAGTGTC
mismatches:
2
bulges:
1
View larger
pre-miRNA
AGAT
CACTCGACCCCCTGGTCGAGTAGA
GGACATCACTACTTCACCACATC
ACTCGACCACGAGGTCGAGTGTC
T
dot-bracket secondary structure
(((.
(((((((((.(.(((((((((.((
((..............))...))
))))))))).).)))))))))))
)
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10471-akr
:
3e-37
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf10157-akr
from PMRD (
MNEST047257
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record