ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf11070-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGCATGTGATACCTTTTTG miRNA* AAAAGGTATCACATGCGAAG mismatches: 1 bulges: 0 |
pre-miRNA
AGGCCAAACTTGGCATGTGATACCTTTTTGGAATGCCCAAAGAGAGCTCTGAATTCCAATTTCCTTCCTCATTCATTGGAGAGCTCTCTTTGGGCTTTCC
GAAAAGGTATCACATGCGAAGTTTCGCCT
dot-bracket secondary structure
((((.((((((.(((((((((((((((((((((.(((((((((((((((.....((((((..............))))))))))))))))))))).))))
))))))))))))))))).)))))).))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
AGGCCAAACTTGGCATGTGATACCTTTTTGGAATGCCCAAAGAGAGCTCTGAATTCCAATTTCCTTCCTCATTCATTGGAGAGCTCTCTTTGGGCTTTCC
GAAAAGGTATCACATGCGAAGTTTCGCCT
dot-bracket secondary structure
((((.((((((.(((((((((((((((((((((.(((((((((((((((.....((((((..............))))))))))))))))))))).))))
))))))))))))))))).)))))).))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
