ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf11100-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTCGACCTGGTGGTCGAGTG miRNA* ACTCGACCAGGGGGTCGAGTGG mismatches: 2 bulges: 1 |
pre-miRNA
GATACTCGACCTGGTGGTCGAGTGAAGTGATTGAGTGACTCTCATGGTGGTATTCGGCCAGGTGGTCAAGTGGTGAAGTCTTCTACTCGACCAGGGGGTC
GAGTGGTC
dot-bracket secondary structure
..((((((((((..((((((((((((((.((((..(((((..(.((((.(....).)))))..)))))..)))).)...)))).)))))))))..)))))
)))))...
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
GATACTCGACCTGGTGGTCGAGTGAAGTGATTGAGTGACTCTCATGGTGGTATTCGGCCAGGTGGTCAAGTGGTGAAGTCTTCTACTCGACCAGGGGGTC
GAGTGGTC
dot-bracket secondary structure
..((((((((((..((((((((((((((.((((..(((((..(.((((.(....).)))))..)))))..)))).)...)))).)))))))))..)))))
)))))...
SIMILARITIES| miRBase no hits PMRD ath-miRf10806-akr: 1e-56 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10806-akr from PMRD (MNEST047906) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
