ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf11147-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTTCGATCTCCGCCGCTACT miRNA* TTGCGGTGGAAGGTCGGGC mismatches: 2 bulges: 1 |
pre-miRNA
GTTCGATCTCCGCCGCTACTAGTTTTCCTCAGGTAATCGTATCTGCTGCATCTTTCAATAGAACGCTATGGTACGAGATTGGATCTGCTGTTGCGGTGGA
AGGTCGGGC
dot-bracket secondary structure
((((((((((((((((.((.(((..(((........(((((((....((.(((......)))..))...)))))))....)))...))))).))))))).
)))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
GTTCGATCTCCGCCGCTACTAGTTTTCCTCAGGTAATCGTATCTGCTGCATCTTTCAATAGAACGCTATGGTACGAGATTGGATCTGCTGTTGCGGTGGA
AGGTCGGGC
dot-bracket secondary structure
((((((((((((((((.((.(((..(((........(((((((....((.(((......)))..))...)))))))....)))...))))).))))))).
)))))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q9LXA8|BXL6_ARATH: 0.000000000004 RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
