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ABOUT THIS RECORD
ID:
MNEST048257
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf11157-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTTGGTGTCGGTCGACACTG
miRNA*
GGTGTCGATCGACACCCAGCTGT
mismatches:
1
bulges:
2
View larger
pre-miRNA
ATCGACACCC
TGTTGGTGTCGGTCGACACTG
TCGCGTTCTGTAGTGTCTGTCGTGGCT
GGTGTCGATCGACACCCAGCTGT
GTCGGT
dot-bracket secondary structure
((((((((..
.((((((((((((((((((((
(((((....(......)...)))))).
)))))))))))))).))))).))
))))))
SIMILARITIES
miRBase
ath-MIR401
:
0.001
PMRD
ath-miRf11158-akr
:
3e-44
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf11158-akr
from PMRD (
MNEST048258
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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