ABOUT THIS RECORDspecies: Brachypodium distachyon
source: PMRD, original name: bdi-miR2505
Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTCTAAGTCAATCTCTAAAT miRNA* TCGGACATCAACTTAGATGC mismatches: 6 bulges: 0 |
pre-miRNA
GGATCCCCTTTATATCCTGCTTCTAAGTCAATCTCTAAATTCACAAGTCAAATTCAATGCTTATATTTGATTTGTGGATTCGGACATCAACTTAGATGCG
GGATATAGGCGGGATCT
dot-bracket secondary structure
(((((((.((((((((((((.(((((((..((.((..((((((((((((((((...........))))))))))))))))..)).))..))))))).)))
))))))))).)))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GGATCCCCTTTATATCCTGCTTCTAAGTCAATCTCTAAATTCACAAGTCAAATTCAATGCTTATATTTGATTTGTGGATTCGGACATCAACTTAGATGCG
GGATATAGGCGGGATCT
dot-bracket secondary structure
(((((((.((((((((((((.(((((((..((.((..((((((((((((((((...........))))))))))))))))..)).))..))))))).)))
))))))))).)))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
