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ABOUT THIS RECORD
ID:
MNEST048389
species:
Brassica oleracea
source:
PMRD, original name:
bol-miR391
Taxonomy by NCBI:
Brassica oleracea
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTCGCAGGAGAGATAGCGCCA
miRNA*
ACGGTATCTCTCCTACGTAGC
mismatches:
4
bulges:
0
View larger
pre-miRNA
AAGGTTCGC
TTCGCAGGAGAGATAGCGCCA
TCACTTCTTCTTAAGAGTTTAGAAGATGGTG
ACGGTATCTCTCCTACGTAGC
AATCCTT
dot-bracket secondary structure
((((...((
(.((.((((((((((.((.((
((((((((.((....))...))))).)))))
.)).)))))))))).)).)))
...))))
SIMILARITIES
miRBase
ath-MIR391
:
8e-20
PMRD
ath-miRf10313-akr
:
8e-20
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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