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ABOUT THIS RECORD
ID:
MNEST048455
species:
Chlamydomonas reinhardtii
source:
PMRD, original name:
cre-miR1155
Taxonomy by NCBI:
Chlamydomonas reinhardtii
Chlamydomonas
Chlamydomonadaceae
Chlamydomonadales
Chlorophyceae
Chlorophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGTCCTGCACGAGGAAGGAGC
miRNA*
TCGTTCCTCAAGCAGGACTCAA
mismatches:
4
bulges:
0
View larger
pre-miRNA
TGAGGC
TCGTTCCTCAAGCAGGACTCAA
AGAACCCGATCAGCTTGTCGAGCACGACAAGGTGATCGTGTTTTCT
TAGTCCTGCACGAGGAAGGAGC
CCCA
dot-bracket secondary structure
.(.(((
((.((((((..((((((((.(.
(((((.((((((.(((((((....))))))).)))))).))))).)
.))))))))..)))))).))))
).).
SIMILARITIES
miRBase
cre-MIR1155
:
5e-52
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
cre-MIR1155
from miRBase (
MNEST039345
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC,
Nature. 447:1126-1129(2007).
,
"miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii"