ABOUT THIS RECORDspecies: Cycas rumphii
source: PMRD, original name: cru-miR156
Taxonomy by NCBI:
Cycas rumphii Cycas Cycadaceae Cycadales Cycadopsida Cycadophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGAGAGCAC miRNA* GAAGCTGTC mismatches: 18 bulges: 0 |
pre-miRNA
CATATCAAAAGAAGCTGTCCCTGGAGCACTTGAACTCCAAGATTGGGATGACAGAAGAGAGAGAGCAC
dot-bracket secondary structure
)............(..((((((((((........))))).....)))))..)................
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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CATATCAAAAGAAGCTGTCCCTGGAGCACTTGAACTCCAAGATTGGGATGACAGAAGAGAGAGAGCAC
dot-bracket secondary structure
)............(..((((((((((........))))).....)))))..)................
SIMILARITIES| miRBase zma-MIR156j: 1.0E-5 PMRD stu-miR156b: 7.0E-7 microPC miR157: 0.0002 | UniProt no hits RFAM 6mir-156: 0.0008 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
