ABOUT THIS RECORDspecies: Citrus sinensis
source: PMRD, original name: csi-miR156a
Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGAGAGCAC miRNA* GGAAATCTCCCAGTCA mismatches: 9 bulges: 2 |
pre-miRNA
TGACAGAAGAGAGAGAGCACGTCCTGTTGGCGAAGGAAATGGAAATCTCCCAGTCA
dot-bracket secondary structure
.(((....((((.....((..((((........))))..))....))))...))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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TGACAGAAGAGAGAGAGCACGTCCTGTTGGCGAAGGAAATGGAAATCTCCCAGTCA
dot-bracket secondary structure
.(((....((((.....((..((((........))))..))....))))...))).
SIMILARITIES| miRBase zma-MIR156j: 0.0001 PMRD cpt-miR156b: 1e-23 microPC miR157: 0.0001 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
