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ABOUT THIS RECORD

ID: MNEST048477
species: Eschscholzia californica
source: PMRD, original name: eca-miR156

Taxonomy by NCBI:
Eschscholzia californica Eschscholzia Eschscholzioideae Papaveraceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGAGAGCAC

miRNA*
 GTTAAAAATGAGAAACTGTCATCAGTCAATCTACTCTCTTGAGAAGGGTTTCTTGTGATTGAAT

mismatches: 5
bulges: 101
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pre-miRNA
 TGACAGAAGAGAGAGAGCACGACCGGTTGGTGGTGTTAAAAATGAGAAACTGTCATCAGTCAATCTACTCTCTTGAGAAGGGTTTCTTGTGATTGAATCA
CTAGAACTCTTCCTTCTTCTCTCATTATGTCCTGCTAATCTCCTTCTACA

dot-bracket secondary structure
....(((((.((((.(((((.(((....))).)))))...(((((((.((((....))))..............((((((((.((((.(((((...))))
).))))....)))))))).)))))))............)))))))))...


SIMILARITIES
miRBase zma-MIR156j: 0.0005

PMRD ghr-miR157: 0.000007

microPC miR157: 0.0005		UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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