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ABOUT THIS RECORD

ID: MNEST048492
species: Gossypium hirsutum
miRNA family: MIR157
source: PMRD, original name: ghr-miR157

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATGACAGAAGAGAGAGAGCAC

miRNA*
 GCTAATCTCCTTCTGCAA

mismatches: 3
bulges: 3
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pre-miRNA
 ATGACAGAAGAGAGAGAGCACGTCCTGTTGGCGACGATACATACGGAAAACTCCCAGTCATCGGTTTATTATCATGACGAAACTTCCTGGTAGCAGAATC
TTGAAGAGGTTTTTCTTCTCGCTCATTATGACCTGCTAATCTCCTTCTGCAA

dot-bracket secondary structure
.((.((((((.((((.((((.(((.((.((((((.((.......((((((((....(((((.(((.....))))))))....((((..(((......)))
..)))).)))))))).)))))).)).)).))).))))..)))))))))))).


SIMILARITIES
miRBase zma-MIR156j: 0.0001

PMRD cpt-miR156b: 0.000000000002

microPC miR157: 0.0005		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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