miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST048509
species: Gossypium hirsutum
source: PMRD, original name: ghr-miR397a

Taxonomy by NCBI:
Gossypium hirsutum Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TTCATTGAGTGCAGTGTTGATT

miRNA*
TCCACTGGCAATGAGAA

mismatches: 2
bulges: 5

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pre-miRNA
TTCATTGAGTGCAGTGTTGATTAGGCGTAGCAAGTAGGTCTTGCCGCTGTCCACTGGCAATGAGAAACCTGCCTGTGAA

dot-bracket secondary structure
(((((((....(((((..(((..((((..(((((.....))))))))))))))))).)))))))...............

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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