ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR166
source: PMRD, original name: gma-miR166r
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGACCAGGCTTCATTCCCT miRNA* GGAATGCAGTGTGGTCCAAGG mismatches: 3 bulges: 0 |
pre-miRNA
GGGGAATGCAGTGTGGTCCAAGGAGATGATATATCACTTCACCATACTCATATCTTCACAAACTCATCAGATTCAGATGTAATAATAATTTGTAATATAT
GCATATTATGTCTCCTCGGACCAGGCTTCATTCCCT
dot-bracket secondary structure
((((((((.(((.((((((.(((((((.....................................((((.......)))).....(((((.((((.....)
))).)))))))))))).)))))).))).))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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GGGGAATGCAGTGTGGTCCAAGGAGATGATATATCACTTCACCATACTCATATCTTCACAAACTCATCAGATTCAGATGTAATAATAATTTGTAATATAT
GCATATTATGTCTCCTCGGACCAGGCTTCATTCCCT
dot-bracket secondary structure
((((((((.(((.((((((.(((((((.....................................((((.......)))).....(((((.((((.....)
))).)))))))))))).)))))).))).))))))))
SIMILARITIES| miRBase rco-MIR166a: 0.0000004 PMRD ptc-miR166l: 0.000007 microPC miR166: 0.000002 | UniProt no hits RFAM mir-166: 0.000008 |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
