miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST048564
species: Glycine max
miRNA family: MIR169
source: PMRD, original name: gma-miR169p

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CAGCCAAGGATGACTTGCCGG

miRNA*
 GGCAAGTTGGCCTTGGCTA

mismatches: 3
bulges: 0
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pre-miRNA
 CAGCCAAGGATGACTTGCCGGCATTAGCCAAGTGAATGAGCATCATATATATATATATATATATATATATATATATGACTCATGTTCTTGTCGGCAAGTT
GGCCTTGGCTA

dot-bracket secondary structure
.((((((((..((((((((((((..(((.......(((((..((((((((((((((((....))))))))))))))))))))))))..))))))))))))
..)))))))).


SIMILARITIES
miRBase zma-MIR169p: 0.0000003

PMRD gso-miR169a: 2e-18

microPC miR169: 2e-18		UniProt no hits

RFAM MIR169_2: 0.0000004

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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deep sequencing data evidence




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