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ABOUT THIS RECORD

ID: MNEST048614
species: Glycine max
source: PMRD, original name: gma-miR1527

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TAACTCAACCTTACAAAACC

miRNA*
 TTTTGTAAGGTTGAGTTAGA

mismatches: 0
bulges: 0
View larger
pre-miRNA
 CTCACAAGCCGGTTTTGTAAGGTTGAGTTAGACCTCAAATTTCAACATGGTATCAGAGCCATTGAACCACATGCTATCAGGTTTCCGCTATCGGGCCACC
CCCCATTTATGTCTACGAACCAAACCTAATAGTGCTGATCGTGAGGGGGTGTGTTAAGAGTCCCACATCGGATAGGACATGGTCTGACAATATATTTATA
AAGTTGAGGCCTAACTCAACCTTACAAAACCGGCTTGTGAG

dot-bracket secondary structure
(((((((((((((((((((((((((((((((.((((((...(((..(((((......))))))))((((..(.(((((.(((....(((....(((((((
(((........((.((((.(...((......))...).))))))))))))).)))...))).....))).))))).)..)))).................
...)))))).)))))))))))))))))))))))))))))))


SIMILARITIES
miRBase gma-MIR1527: 1e-135

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits

Identical with: gma-MIR1527 from miRBase (MNEST040526)

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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references
[1] Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O, BMC Genomics. 9:160(2008)., "Novel and nodulation-regulated microRNAs in soybean roots"



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