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ABOUT THIS RECORD

ID: MNEST048621
species: Glycine max
source: PMRD, original name: gma-miR1534

Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TATTTTGGGTAAATAGTCAT

miRNA*
 GATTATTTACCCTTTAAAATAAG

mismatches: 0
bulges: 3
View larger
pre-miRNA
 GATTAAATTATATTTTGGGTAAATAGTCATTTTCATCCCTGAATGTGTAGAGCGCTAACAAATTCGTCCTTAAATGTGTCACATAGGCTTTTTCATTAAC
GGTAACAAATGGACAGATTTGTCGCATTTTTTTCACTTTTAGAGACTAAAATTTGAATTTTTATCTTTCGGAGACGAATTTATTAGTGCTCTGCACATTC
AAGGACAAAAATGATTATTTACCCTTTAAAATAAGTTTGGCAT

dot-bracket secondary structure
(.(((((((.(((((((((((((((((((((((..(((.(((((((((((((((((((.(((((((((..(((((.((((.(((..(((.((.....)).
))).....))))))).)))))...............((..(((((..(((((....)))))..)))))..))))))))))).))))))))))))))))))
).)))..)))))))))))))))))...))))))))))))))..


SIMILARITIES
miRBase gma-MIR1534: 2e-124

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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references
[1] Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O, BMC Genomics. 9:160(2008)., "Novel and nodulation-regulated microRNAs in soybean roots"



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