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ABOUT THIS RECORD
ID:
MNEST048622
species:
Glycine max
source:
PMRD, original name:
gma-miR1535
Taxonomy by NCBI:
Glycine max
Glycine
Phaseoleae
Papilionoideae
Fabaceae
Fabales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTTGTTTGTGGTGATGTCT
miRNA*
ACATCACCACAAACAAGTC
mismatches:
0
bulges:
0
View larger
pre-miRNA
TAAGAGGCCTAG
ACATCACCACAAACAAGTC
ACCAAAGAAGGAAGAGTGTCACAGAATCCGGGTGAT
CTTGTTTGTGGTGATGTCT
AGACCTTCCT
dot-bracket secondary structure
...((((.((((
(((((((((((((((((((
(((......(((..............))).))))).
)))))))))))))))))))
)).))))...
SIMILARITIES
miRBase
gma-MIR1535
:
1e-49
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
gma-MIR1535
from miRBase (
MNEST040534
)
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
degradome data
download this record
references
[
1
] Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O,
BMC Genomics. 9:160(2008).
,
"Novel and nodulation-regulated microRNAs in soybean roots"