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ABOUT THIS RECORD

ID: MNEST048676
species: Lotus japonicus
miRNA family: MIR157
source: PMRD, original name: lja-miR157b

Taxonomy by NCBI:
Lotus japonicus Lotus Loteae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGACAGAAGAGAGAGAGCAC

miRNA*
 GCTCTCCCTTCTTCTGTCAT

mismatches: 2
bulges: 1
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pre-miRNA
 TTGACAGAAGAGAGAGAGCACAACCCAGGAATGGTGAAAGAGAGTCTTTGCTTTTGTTGGGAGTGTGCTCTCCCTTCTTCTGTCAT

dot-bracket secondary structure
.(((((((((((.(((((((((.(((((.((.(((.((((.....))))))).)).)))))..)))))))))..))))))))))).


SIMILARITIES
miRBase gma-MIR156f: 5e-27

PMRD gma-miR156b: 3e-22

microPC miR156: 8e-20		UniProt no hits

RFAM mir-156: 0.00000000000008

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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