ABOUT THIS RECORDspecies: Nuphar advena
source: PMRD, original name: nad-miR157b
Taxonomy by NCBI:
Nuphar advena Nuphar Nymphaeaceae Nymphaeales basal Magnoliophyta Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGACAGAAGACAGAGAGCAC miRNA* GCCATCTGTATTCCAGGA mismatches: 9 bulges: 0 |
pre-miRNA
TTGACAGAAGACAGAGAGCACGCCCATCATCAGCACCCGATAAATTAATGTCATTGTATCAGGTGATGAAACAACTGCGGGGTCTGCTGTTGCTTCAGAC
ATGAGGCAAACCGGTATGCTCCTTCTCGGAAGCTGGGGTTTGGACTTGTAGGTTCAGGAAAGCGTACAGCTGTGCCATCTGTATTCCAGGA
dot-bracket secondary structure
......(((.(((((..((((..(((...(((((..((((.............((((.(((.....))).))))....(((((.(((((((((((((...
.))))))))..))))).)))))...))))..)))))....)))..(((((.(((......))).)))))..))))..))))).))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
TTGACAGAAGACAGAGAGCACGCCCATCATCAGCACCCGATAAATTAATGTCATTGTATCAGGTGATGAAACAACTGCGGGGTCTGCTGTTGCTTCAGAC
ATGAGGCAAACCGGTATGCTCCTTCTCGGAAGCTGGGGTTTGGACTTGTAGGTTCAGGAAAGCGTACAGCTGTGCCATCTGTATTCCAGGA
dot-bracket secondary structure
......(((.(((((..((((..(((...(((((..((((.............((((.(((.....))).))))....(((((.(((((((((((((...
.))))))))..))))).)))))...))))..)))))....)))..(((((.(((......))).)))))..))))..))))).))).....
SIMILARITIES| miRBase no hits PMRD nad-miR157c: 0.00000004 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
