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ABOUT THIS RECORD
ID:
MNEST048816
species:
Oryza sativa
source:
PMRD, original name:
osa-miR156p
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCTC
miRNA*
GTTTTTACTCGTTTTTCTCGAT
mismatches:
2
bulges:
2
View larger
pre-miRNA
GA
GTTTTTACTCGTTTTTCTCGAT
TTCTCGATTTCGATGACTCGGAACTAAATAGGTTCTCTAATGACAAGTAAGAGCAAGAAATTTCTAGCACGGAGAA
GCTCTCATGAGAT
TGACAGAAGAGAGTGAGCTC
dot-bracket secondary structure
((
((..((((((.(((((.(((((
(((....((((((....))))))......((.((((((.....(......).((.(((....))).))..))))))
.)).....)))))
))).))))).))))))))))
SIMILARITIES
miRBase
osa-MIR156d
:
0.00000000000003
PMRD
osa-miR156o
:
2e-70
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
not a miRNA
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