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ABOUT THIS RECORD
ID:
MNEST050736
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf11521-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGTCACATCCCCTCCTAGGT
miRNA*
CTAGGAAGGGATGTGACCCC
mismatches:
1
bulges:
0
View larger
pre-miRNA
AAAAGAATCGAC
CTAGGAAGGGATGTGACCCC
TCCTAGGTCTAGGGATGTGACCCCTCCTATATCCACATACATTATTCTGGGAAG
GGTCACATCCCCTC
CTAGGT
TGCTTCTTTT
dot-bracket secondary structure
(((((((.((((
((((((.((((((((((((.
(((((((..((.(((((((........)))))))...))......))))))).)
))))))))))).))
))))))
)).)))))))
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11219-akr
:
0.000006
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 3e-60
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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