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ABOUT THIS RECORD

ID: MNEST050747
species: Oryza sativa
source: PMRD, original name: osa-miRf11532-akr

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTGTCGAACGGAGGCAGTTCGA

miRNA*
 GAACTGCCCCAGTTCGACAGGTA

mismatches: 0
bulges: 2
View larger
pre-miRNA
 TTTAGCACCCTGTCGAACGGAGGCAGTTCGAAAGGGTACCTGTCGAACTGCCCCAGTTCGAAAGGGTACCTGTCGAACTGCCCCAGTTCGACAGGTAATA
AA

dot-bracket secondary structure
........((((((((((((.((((((((((..((((((((.((((((((...))))))))..)))))))).)))))))))))).)))))))))).....
..


SIMILARITIES
miRBase osa-MIR439i: 0.000001

PMRD osa-miRf10636-akr: 2e-27

microPC no hits		UniProt no hits

RFAM MIR439: 2e-42

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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