miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST050754
species: Oryza sativa
source: PMRD, original name: osa-miRf11539-akr

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
AGCTGCCGACTGGTTTCCAGTCGG

miRNA*
GACTGGTTTCCAGTCGGCGGCTGG

mismatches: 3
bulges: 0

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pre-miRNA
GACCCACATCCGACTGGTTTCCAGTCGGGGGCTCTTGGGTTGTTGCAGTTTCAGTAGCTGCCGACTGGTTTCCAGTCGGCGGCTGGTC

dot-bracket secondary structure
((((((..(((((((((...)))))))))......)))))).............((((((((((((((...))))))))))))))...

SIMILARITIES

miRBase no hits

PMRD osa-miRf11069-akr: 2e-42

microPC no hits

UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: not a miRNA
additional data
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