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ABOUT THIS RECORD
ID:
MNEST050805
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf11590-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCCGGTTGATAACACCAACCGGGA
miRNA*
TCGGTTGGTGTTACCAACCGGGACT
mismatches:
1
bulges:
0
View larger
pre-miRNA
TAG
TCCCGGTTGATAACACCAACCGGGA
AAAAAGATCGCCATACGCTTTACTC
TCGGTTGGTGTTACCAACCGGGACT
A
dot-bracket secondary structure
(((
(((((((((.(((((((((((((((
..((((..((.....))))))..))
))))))))))))).)))))))))))
)
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11591-akr
:
1e-39
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
osa-miRf11589-akr
from PMRD (
MNEST050804
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record