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ABOUT THIS RECORD
ID:
MNEST050807
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf11592-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGACCGGCTGTGCAATGCCAGTC
miRNA*
CCGGCCATGCAGAGCCGGTCAGA
mismatches:
5
bulges:
0
View larger
pre-miRNA
CGGTCGGA
CCGGCCATGCAGAGCCGGTCAGA
CCGCCGGTCATCACCGGTC
AGACCGGCTGTGCAATGCCAGTC
AGACCG
dot-bracket secondary structure
(((((.((
(.(((..((((.((((((((.((
(((...(....)..)))))
.)))))))).))))..))).)))
.)))))
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf11633-akr
:
4e-18
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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