miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST050810
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf11595-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CATCGGTGTTGGAGGTGGC
miRNA*
CACTCTGCTGCCACCGATG
mismatches:
2
bulges:
2
View larger
pre-miRNA
CATCGGTGTTGGAGGTGGC
GGGGACGAGGTGCTTCTCTAGAGCGGTGCCACTACTGCCACCACCGTGGAATTGACGAGGCACAATGCCCACCTCACCCTC
CGCTGC
CACTCTGCTGCCACCGATG
dot-bracket secondary structure
((((((((..(((((((((
(((((.(((((((((.....)))).(((((.......((((....)))).........))))).......)))))....))
).))))
))).)).))..))))))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
not a miRNA
additional data
download this record